BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F04LP1|AL428578
(644 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1544 1184 0.0
>3x_Contig1544
Length = 10626
Score = 1184 bits (584), Expect = 0.0
Identities = 621/644 (96%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 2 aaagtcacggtgtccaattctgcaatcagtttctccattgcagtaagtttaccgtccgga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5414 aaagtcacggtgtccaattctgcaatcagtttctccattgcagtaagtttaccgtccgga 5473
Query: 62 gagttaagctcaggttcagctgatttagacacgatttcaggttcaacgacgactgacggt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5474 gagttaagctcaggttcagctgatttagacacgatttcaggttcaacgacgactgacggt 5533
Query: 122 atctgctcaatttgtttgaggtcattgtyaggatacaacggattaatttcttcttcgtca 181
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5534 atctgctcaatttgtttgaggtcattgttaggatacaacggattaatttcttcttcgtca 5593
Query: 182 acttcttctggtacctctgaatccattggctcctctggtgcctgtmtcgagactactggt 241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5594 acttcttctggtacctctgaatccattggctcctctggtgcctgtatcgagactactggt 5653
Query: 242 actggaggtagatcatgcacatctgaagtttcactgaccaaaatatttvgsatcaaagct 301
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 5654 actggaggtagatcatgcacatctgaagtttcactgaccaaaatatttgggatcaaagct 5713
Query: 302 ggttccggctcatcatggagcagtgctttactcaaagcactatttggagcaaaattcaca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5714 ggttccggctcatcatggagcagtgctttactcaaagcactatttggagcaaaattcaca 5773
Query: 362 ctgatatgattgcmcacatcggcatcatcaacggaagamtgahaacyatcccgaa-gtha 420
||||||||||||| |||||||||||||||||||||||| ||| ||| |||||||| || |
Sbjct: 5774 ctgatatgattgctcacatcggcatcatcaacggaagaatgataactatcccgaaggtta 5833
Query: 421 tccccgtcatcctgactgtctctmthcacacttsavthtmctgtcaattgcatgaacgat 480
||||||||||||||||||||||| | ||||||| | | | ||||||||||||||||||||
Sbjct: 5834 tccccgtcatcctgactgtctcttttcacacttgagttttctgtcaattgcatgaacgat 5893
Query: 481 tgtmccacaggatcgahacctggtggaaactgttctccagagtcacccatttgcvgcgta 540
||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5894 tgttccacaggatcgatacctggtggaaactgttctccagagtcacccatttgcggcgta 5953
Query: 541 ttakragtdgacgaggaattgctctgtgcagtataggaaccaacagcaggtccagaagtg 600
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5954 ttataagtagacgaggaattgctctgtgcagtataggaaccaacagcaggtccagaagtg 6013
Query: 601 aaggggaatccactgccacctgtggttaawttcggcgagctcgc 644
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6014 aaggggaatccactgccacctgtggttaaattcggcgagctcgc 6057
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3140
Number of Sequences: 1807
Number of extensions: 3140
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 644
length of database: 10,358,551
effective HSP length: 16
effective length of query: 628
effective length of database: 10,329,639
effective search space: 6487013292
effective search space used: 6487013292
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)